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Davesne D, Friedman M, Barriel V, Lecointre G, Janvier P, Gallut C, Otero O.  2014.  Early fossils illuminate character evolution and interrelationships of Lampridiformes (Teleostei, Acanthomorpha). Zoological Journal of the Linnean Society. 172(2):475-498. Abstract
Cunchillos C, Lecointre G.  2002.  Early steps of metabolism evolution inferred by cladistic analysis of amino acid catabolic pathways. Comptes Rendus Biologies. 325:119-129. Abstract
Regnier V, Meddeb M, Lecointre G, Richard F, Duverger A, Nguyen VG, Dutrillaux B, Bernheim A, Danglot G.  1997.  Emergence and scattering of multiple neurofibromatosis (NF1)-related sequences during hominoid evolution suggest a process of pericentromeric interchromosomal transposition. Human Molecular Genetics. 6:9-16. Abstract
Lecointre G, Rachdi L, Darlu P, Denamur E.  1998.  Escherichia coli molecular phylogeny using the incongruence length difference test. Molecular Biology And Evolution. 15:1685-1695. Abstract
Koubbi P, Ozouf-Costaz C, Moteki M, Goarant A, Hulley PA, Dettaï A, Duhamel G, Pruvost P, Causse R, Tavernier E et al..  2010.  Estimating the biodiversity of the East Antarctic shelf and oceanic zone for ecoregionalisation: example of the ichthyofauna of the CEAMARC (Collaborative East Antarctic Marine Census) CAML surveys.. Polar Science. 4
Chanet B, Guintard C, Betti E, Gallut C, Dettaï A, Lecointre G.  2013.  Evidence for a close phylogenetic relationship between the teleost orders Tetraodontiformes and Lophiiformes based on an analysis of soft anatomy. Cybium. 37(3):179-198. Abstract
Denamur E, Lecointre G, Darlu P, Tenaillon O, Acquaviva C, Sayada C, Sunjevaric I, Rothstein R, Elion J, Taddei F et al..  2000.  Evolutionary implications of the frequent horizontal transfer of mismatch repair genes. Cell. 103:711-721. Abstract
Hassanin A, Lecointre G, Tillier S.  1998.  The 'evolutionary signal' of homoplasy in protein-coding gene sequences and its consequences for a priori weighting in phylogeny. Comptes Rendus de l'Académie des Sciences Série III: Sciences de la Vie. 321:611-620. Abstract
Cunchillos C, Lecointre G.  2003.  Evolution of amino acid metabolism inferred through cladistic analysis. Journal of Biological Chemistry. 278:47960-47970. Abstract
Roman T, Lecointre G, Charlemagne J.  2001.  Evolution of antibody diversity in bony vertebrates. M/S : médecine sciences. 17:897-902. Abstract
Feutry P, Castelin M, Ovenden JR, Dettaï A, Robinet T, Cruaud C, Keith P.  2013.  Evolution of Diadromy in Fish: Insights from a Tropical Genus (Kuhlia Species). The American Naturalist. 181(1) Abstract
Chanet B, Guintard C, Betti E, Clement G, Meunier FJ, Ahlberg P.  2007.  Experimental anatomical imaging in osteichthyan fishes. Journal of Morphology. 268:1058.
Chanet B, Branellec A-L.  2008.  Expliquer la biologie des espèces par leurs relations de parenté. Exemple des Scophthalmidae [Teleostéens : Pleuronectiformes].. Bulletin de la Société des Sciences naturelles de l'Ouest de la France. 30:81-89. Abstract
Iglésias S, Lecointre G, Sellos DY.  2005.  Extensive paraphylies within sharks of the order Carcharhiniformes inferred from nuclear and mitochondrial. Molecular Phylogenetics and Evolution. 34:569-583. Abstract