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201
Chanet B, Lecointre G, Guintard C.  201.  The gas bladder of puffers and porcupinefishes (Acanthomorpha: Tetraodontiformes): Phylogenetic interpretations.. Journal of Morphology. 275(8):894–901. Abstract
333
Chanet B, Guintard C, Lecointre G.  333.  The Gas Bladder of Puffers and Porcupinefishes (Acanthomorpha: Tetraodontiformes): Phylogenetic Interpretations.. Journal of Morphology. Abstract
1993
Lecointre G, Philippe H, Lê HLVân, Le Guyader H.  1993.  Species sampling has a major impact on phylogenetic inference. Molecular Phylogenetics and Evolution. 2:205-224.
1994
Lecointre G, Philippe H, Lê HLVân, Le Guyader H.  1994.  How many nucleotides are required to resolve a phylogenetic problem? The use of a new statistical method applicable to available sequences Molecular Phylogenetics and Evolution. 3:292-309.
1996
Lecointre G.  1996.  Methodological aspects of molecular phylogeny of fishes. Zoological Studies. 35:161-177. Abstract
Lecointre G.  1996.  Absence of arguments. La Recherche. :6.
Philippe H, Lecointre G, VanLe HL, Le Guyader H.  1996.  A critical study of homoplasy in molecular data with the use of a morphologically based cladogram, and its consequences for character weighting. Molecular Biology And Evolution. 13:1174-1186. Abstract
1997
Vuillaumier S, Kaltenboeck B, Lecointre G, Lehn P, Denamur E.  1997.  Phylogenetic analysis of cystic fibrosis transmembrane conductance regulator gene in mammalian species argues for the development of a rabbit model for cystic fibrosis. Molecular Biology And Evolution. 14:372-380. Abstract
Denamur E, Lecointre G.  1997.  DNA from Neandertal. M/S : médecine sciences. 13:1488-1490.
Ritchie PA, Lavoue S, Lecointre G.  1997.  Molecular phylogenetics and the evolution of Antarctic Notothenioid fishes. COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY A-MOLECULAR & INTEGRATIVE PHYSIOLOGY. 118:1009-1025. Abstract
Mollaret I, Jamieson BGM, Adlard RD, Hugall A, Lecointre G, Chombard C, Justine JL.  1997.  Phylogenetic analysis of the Monogenea and their relationships with Digenea and Eucestoda inferred from 28S rDNA sequences. Molecular And Biochemical Parasitology. 90:433-438. Abstract
Regnier V, Meddeb M, Lecointre G, Richard F, Duverger A, Nguyen VG, Dutrillaux B, Bernheim A, Danglot G.  1997.  Emergence and scattering of multiple neurofibromatosis (NF1)-related sequences during hominoid evolution suggest a process of pericentromeric interchromosomal transposition. Human Molecular Genetics. 6:9-16. Abstract
Vidal N, Lecointre G, Vie JC, Gasc JP.  1997.  Molecular systematics of pitvipers: Paraphyly of the Bothrops complex. Comptes Rendus de l'Académie des Sciences Série III: Sciences de la Vie. 320:95-101. Abstract
Vuillaumier S, Hinnrasky J, Lecointre G, Lapoumeroulie C, Koltenboeck B, Lehn P, Puchelle E, Denamur E.  1997.  Polygenetic analysis of CFTR gene expression in mammalian species: Could the rabbit lead to a accurate CF animal model? M/S : médecine sciences. 13:673-677. Abstract
Lecointre G, Bonillo C, Ozouf-Costaz C, Hureau JC.  1997.  Molecular evidence for the origins of Antarctic fishes: paraphyly of the Bovichtidae and no indication for the monophyly of the Notothenioidei (Teleostei). Polar Biology. 18:193-208. Abstract
1998
Gilles A, Lecointre G, Faure E, Chappaz R, Brun G.  1998.  Mitochondrial phylogeny of the European cyprinids: Implications for their systematics, reticulate evolution, and colonization time. Molecular Phylogenetics and Evolution. 10:132-143. Abstract
Lecointre G, Rachdi L, Darlu P, Denamur E.  1998.  Escherichia coli molecular phylogeny using the incongruence length difference test. Molecular Biology And Evolution. 15:1685-1695. Abstract
Leclerc MC, Barriel V, Lecointre G, de Reviers B.  1998.  Low divergence in rDNA ITS sequences among five species of Fucus (Phaeophyceae) suggests a very recent radiation. Journal of Molecular Evolution. 46:115-120. Abstract
Hassanin A, Lecointre G, Tillier S.  1998.  The 'evolutionary signal' of homoplasy in protein-coding gene sequences and its consequences for a priori weighting in phylogeny. Comptes Rendus de l'Académie des Sciences Série III: Sciences de la Vie. 321:611-620. Abstract
Vidal N, Lecointre G.  1998.  Weighting and congruence: A case study based on three mitochondrial genes in pitvipers. Molecular Phylogenetics and Evolution. 9:366-374. Abstract
Depaquit J, Perrotey S, Lecointre G, Tillier A, Tillier S, Ferte H, Kaltenbach M, Leger N.  1998.  Molecular systematics of Phlebotominae: a pilot study. Paraphyly of the genus Phlebotomus. Comptes Rendus de l'Académie des Sciences Série III: Sciences de la Vie. 321:849-855. Abstract
Chen W-J, Bonillo C, Lecointre G.  1998.  Channichthyid phylogeny based on two mitochondrial genes. Fishes of Antarctica: a biological overview. :287-298. Abstract
Bargelloni L, Lecointre G.  1998.  Four years in Notothenioid systematics: a molecular perspective. Fishes of Antarctica: a biological overview. :259-273.
2000
Lavoue S, Bigorne R, Lecointre G, Agnese JF.  2000.  Phylogenetic relationships of mormyrid electric fishes (Mormyridae; Teleostei) inferred from cytochrome b sequences. Molecular Phylogenetics and Evolution. 14:1-10. Abstract
Denamur E, Lecointre G, Darlu P, Tenaillon O, Acquaviva C, Sayada C, Sunjevaric I, Rothstein R, Elion J, Taddei F et al..  2000.  Evolutionary implications of the frequent horizontal transfer of mismatch repair genes. Cell. 103:711-721. Abstract